The detailed information of tRNA gene sequence


Sequence ID>WENV170680276
Genome IDLFCJ01006966
Search identical group
Phylum/Class[LFCJ] soda lake metagenome; sample B1-Br-g2; brine of Lake Bitter-1
Species
Start position on genome 3620
End posion on genome 3696
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaatatat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCAAA
TCCTTCCCCCGCAACCA
Downstream region at tRNA end position 
ttttaattaa
Secondary structure (Cloverleaf model)
>WENV170680276	Met	CAT
                   t      ACCA ttttaattaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      T G A        G      | + | | |     A
    C       C G A G       G G A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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