The detailed information of tRNA gene sequence


Sequence ID>WENV170681470
Genome IDLFFM01001020
Search identical group
Phylum/Class[LFFM] soda lake metagenome; sample Tc-Br; brine of Tanatar trona crystallizer
Species
Start position on genome 2554
End posion on genome 2468
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
acgaacgcgg
tRNA gene sequence 
GTTGCGGTAGCCAAGTCTGGCCCAAGGCGCAGGGTTGCTAACTCTGTGGCGTCACTGCCT
CCGGGGTTCGAATCCCCGCCGCAACGCtc
Downstream region at tRNA end position 
gaacggaccg
Secondary structure (Cloverleaf model)
>WENV170681470	Ser	GCT
                   g      GCtc gaacggaccg
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C T G A        A      | | | | |     G
  T         A C C G       C G G G G     C
  G           | | |                 T T
  G         A G G C
    C C C A        G     TGGCGTCACTGCCTC
                    C - G
                    A - T
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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