The detailed information of tRNA gene sequence


Sequence ID>WENV170681546
Genome IDLFFM01001332
Search identical group
Phylum/Class[LFFM] soda lake metagenome; sample Tc-Br; brine of Tanatar trona crystallizer
Species
Start position on genome 4185
End posion on genome 4101
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacgcatcac
tRNA gene sequence 
GGTGGGATGGCAGAGTGGCCCATTGCGCCGGTCTTGAAAACCGGTAGCCTCACGGCTTCC
TGGGTTCAAATCCCAGTCCCACCGCgt
Downstream region at tRNA end position 
tcgtctctcg
Secondary structure (Cloverleaf model)
>WENV170681546	Ser	TGA
                   c      GCgt tcgtctctcg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     A
    G       G A C G       C T G G G     C
    G       + | | |                 T T
    C       T T G C
      C C A        G     TAGCCTCACGGCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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