The detailed information of tRNA gene sequence


Sequence ID>WENV170682190
Genome IDLFFM01007031
Search identical group
Phylum/Class[LFFM] soda lake metagenome; sample Tc-Br; brine of Tanatar trona crystallizer
Species
Start position on genome 1351
End posion on genome 1435
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacgcgtcgt
tRNA gene sequence 
GGTGGGATGGCAGAGTGGCCCATTGCGCCGGTCTTGAAAACCGGTAGCCTCACGGCTTCC
TGGGTTCAAATCCCAGTCCCACCGCtt
Downstream region at tRNA end position 
cccgtcgatg
Secondary structure (Cloverleaf model)
>WENV170682190	Ser	TGA
                   t      GCtt cccgtcgatg
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      T G A        G      | | | | |     A
    G       G A C G       C T G G G     C
    G       + | | |                 T T
    C       T T G C
      C C A        G     TAGCCTCACGGCTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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