The detailed information of tRNA gene sequence


Sequence ID>WENV170682448
Genome IDLFIK01000136
Search identical group
Phylum/Class[LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5
Species
Start position on genome 48627
End posion on genome 48712
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaggttaag
tRNA gene sequence 
GCATCCATGGCTGAGTGGTCGAAAGCATTGGACTCATAATCCAAATTCCATTAGGAACGT
CGTTGGTTCAAGTCCAACTGGATGCAatt
Downstream region at tRNA end position 
attaccttgg
Secondary structure (Cloverleaf model)
>WENV170682448	Met	CAT
                   g      Aatt attaccttgg
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     C - G
                     A - T          T G
                    T     C A A C C     A
      T G A        G      | | | | |     A
    G       G T C G       G T T G G     C
    G         | | |                 T T
    T       A A G C
      C G A        A     ATTCCATTAGGAACGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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