The detailed information of tRNA gene sequence


Sequence ID>WENV170682730
Genome IDLFIK01000962
Search identical group
Phylum/Class[LFIK] soda lake metagenome; sample T5-Br; brine of Lake Tanatar-5
Species
Start position on genome 11576
End posion on genome 11483
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agccgaccct
tRNA gene sequence 
GGAAGTGTGGCTGAGCCAGGTTGAAGGCACCCGATTCGAAATCGGGCGGACGGTGAGAGC
CGTCCCGTGGGTTCAAATCCCACCACTTCCGCCA
Downstream region at tRNA end position 
ccatccacct
Secondary structure (Cloverleaf model)
>WENV170682730	Ser	CGA
                   t      GCCA ccatccacct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C A C C C     A
    C C G A        G      | | | | |     A
  A         G T C G       G T G G G     C
  G           + | |                 T T
  G         A G G C
    T T G A        A     CGGACGGTGAGAGCCGTCCC
                    C - G
                    C - G
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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