The detailed information of tRNA gene sequence


Sequence ID>WENV170683688
Genome IDLFRM01000276
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 524
End posion on genome 440
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
ttttgtgttt
tRNA gene sequence 
GCGCAGGTGGTGAAATTGGTATACACGCTACTTTGAGGGGGTAGTGCCGGTTACGGCATG
TGAGTTCGAGTCTCATCCTGCGCACtt
Downstream region at tRNA end position 
ttatcaaacc
Secondary structure (Cloverleaf model)
>WENV170683688	Leu	GAG
                   t      ACtt ttatcaaacc
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C          T G
                    T     T A C T C     A
      T A A        G      + | | | |     G
    T       A G T G       G T G A G     C
    G         | | |                 T T
    G       A C A C
      T A T        G     TGCCGGTTACGGCAT
                    C - G
                    T - A
                    A - T
                    C - G
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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