The detailed information of tRNA gene sequence


Sequence ID>WENV170683694
Genome IDLFRM01000422
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 20231
End posion on genome 20306
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
catgatacat
tRNA gene sequence 
AGGGGAGTAGCTCAATTGGTAGAGTAGCGGTCTCCAAAACCGTGGGCTGCGGGTTCGAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
cagaaaagcc
Secondary structure (Cloverleaf model)
>WENV170683694	Trp	CCA
                   t      GCCA cagaaaagcc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     GGGCT
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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