The detailed information of tRNA gene sequence


Sequence ID>WENV170683702
Genome IDLFRM01000720
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 372
End posion on genome 456
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
ttcatgtagt
tRNA gene sequence 
GCCCGGGTGGCGGAACTGGCAGACGCGCACGTTTGAGGGGCGTGTGGTTTATACCGTACG
AGTTCAAGTCTCGTCCCGGGCACCA
Downstream region at tRNA end position 
tccttgtacg
Secondary structure (Cloverleaf model)
>WENV170683702	Leu	GAG
                   t      ACCA tccttgtacg
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     T G C T C     A
      C A A        G      | | | | |     A
    T       G G C G       A C G A G     C
    G         | | |                 T T
    G       A C G C
      C A G        G     TGGTTTATACCGT
                    C - G
                    A - T
                    C - G
                    G - C
                    T + G
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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