The detailed information of tRNA gene sequence


Sequence ID>WENV170683707
Genome IDLFRM01000902
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1853
End posion on genome 1778
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
atcctcgcgc
tRNA gene sequence 
GCACCACTAGCTCAACTGGCAGAGCAGCTGACTCTTAATCAGCGGGTTCAGGGTTCGAGT
CCCTGGTGGTGTACCA
Downstream region at tRNA end position 
cacagaaggc
Secondary structure (Cloverleaf model)
>WENV170683707	Lys	CTT
                   c      ACCA cacagaaggc
                     G + T
                     C - G
                     A - T
                     C - G
                     C - G
                     A - T
                     C - G          T G
                    T     G T C C C     A
      C A A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGTT
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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