The detailed information of tRNA gene sequence


Sequence ID>WENV170683732
Genome IDLFRM01001691
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 167
End posion on genome 91
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aaaagtatat
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTAGTTCGAG
TCTACTTAGGCCCACCA
Downstream region at tRNA end position 
ttaactttga
Secondary structure (Cloverleaf model)
>WENV170683732	Ile	GAT
                   t      ACCA ttaactttga
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     T C A T C     A
      T G A        A      + | | | |     G
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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