The detailed information of tRNA gene sequence


Sequence ID>WENV170683761
Genome IDLFRM01002773
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 858
End posion on genome 934
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
cgagcaacgg
tRNA gene sequence 
CGGGCTGTGGCGCAGCTTGGTAGCGCACTACACTGGGGGTGTAGGGGTCGCAGGTTCAAA
TCCTGTCAGCCCGACCA
Downstream region at tRNA end position 
ctgtttgacg
Secondary structure (Cloverleaf model)
>WENV170683761	Pro	GGG
                   g      ACCA ctgtttgacg
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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