The detailed information of tRNA gene sequence


Sequence ID>WENV170683779
Genome IDLFRM01003277
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 28593
End posion on genome 28669
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ataaatattt
tRNA gene sequence 
GGCCTGGTAGTTCAGTTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGTCGGTTCGAG
CCCGATCCAGGTCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170683779	Asp	GTC
                   t      GCCA nnnnnnnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          C G
                    T     T A G C C     A
      T G A        A      + | | | |     G
    T       C T T G       G T C G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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