The detailed information of tRNA gene sequence


Sequence ID>WENV170683804
Genome IDLFRM01005997
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 19832
End posion on genome 19756
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ccttccacgt
tRNA gene sequence 
GGGGCCGTGGGTTAGCTTGGCCATACTCGGGCGTTCGGGACGCCTGGACGCCAGTTCAAA
TCTGGCCGGCCCCACCA
Downstream region at tRNA end position 
tcgttcttca
Secondary structure (Cloverleaf model)
>WENV170683804	Pro	CGG
                   t      ACCA tcgttcttca
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     C G G T C     A
    T C G A        G      | | | | |     A
  T         T T G G       G C C A G     C
  G           | | +                 T T
  G         T A C T
    C C A          C     GGAC
                    G + T
                    G - C
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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