The detailed information of tRNA gene sequence


Sequence ID>WENV170683823
Genome IDLFRM01007176
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 357
End posion on genome 282
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
taatgcagtt
tRNA gene sequence 
GGAGGATTAGCTCAGCTGGGAGAGCACCTGCCTTACAAGCAGGGGGTCGGCGGTTCGATC
CCGTCATCCTCCACTA
Downstream region at tRNA end position 
tgactcgtta
Secondary structure (Cloverleaf model)
>WENV170683823	Val	TAC
                   t      ACTA tgactcgtta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          C T
                    T     C T G C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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