The detailed information of tRNA gene sequence


Sequence ID>WENV170683831
Genome IDLFRM01007312
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 11406
End posion on genome 11480
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
atgtattgat
tRNA gene sequence 
GGCCCATTGGTCAAGTGGTTAAGACACCGCCCTTTCACGGCGGCAACAGGGGTTCGAATC
CCCTATGGGTCACCA
Downstream region at tRNA end position 
ttttttaata
Secondary structure (Cloverleaf model)
>WENV170683831	Glu	TTC
                   t      ACCA ttttttaata
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     CAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK