The detailed information of tRNA gene sequence


Sequence ID>WENV170683842
Genome IDLFRM01007734
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 45299
End posion on genome 45373
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aattagaaac
tRNA gene sequence 
GGGTGCGTAGCTCAGTGGGAGAGCGCTTCCTTGACGCGGAAGAGGCCGTAGGTTCAATCC
CTACCGCACCCACCA
Downstream region at tRNA end position 
ttcatcaatt
Secondary structure (Cloverleaf model)
>WENV170683842	Val	GAC
                   c      ACCA ttcatcaatt
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     C - G
                     G - C          C T
                    T     C A T C C     A
        G A        A      | | | | |     A
      T     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGCC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       C
                  T       G
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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