The detailed information of tRNA gene sequence


Sequence ID>WENV170683847
Genome IDLFRM01007932
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1141
End posion on genome 1051
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
caggcaaata
tRNA gene sequence 
GGACAGGTGGCCGAGCGGTTGAAGGCGCACGCCTGGAAAGCGTGTATACGTGAATAGCGT
ATCGGGGGTTCGAATCCCCCTCTGTCCGCCA
Downstream region at tRNA end position 
ataattcgtt
Secondary structure (Cloverleaf model)
>WENV170683847	Ser	GGA
                   a      GCCA ataattcgtt
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGTGAATAGCGTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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