The detailed information of tRNA gene sequence


Sequence ID>WENV170683894
Genome IDLFRM01009575
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 456
End posion on genome 532
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
accaggaaac
tRNA gene sequence 
GGGCTTGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCAAG
TCCTCCCAAGCCCACCA
Downstream region at tRNA end position 
aggatgagga
Secondary structure (Cloverleaf model)
>WENV170683894	Ile	GAT
                   c      ACCA aggatgagga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     T - A
                     G - C          T G
                    T     C C T C C     A
      G G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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