The detailed information of tRNA gene sequence


Sequence ID>WENV170683919
Genome IDLFRM01009795
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2142
End posion on genome 2216
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
tatattattt
tRNA gene sequence 
GGCGCCATAGCCAAGTGGTAAGGCAGAGGTCTGCAAAACCTTTATTCCCCAGTTCGAATC
TGGGTGGCGCCTCCA
Downstream region at tRNA end position 
tacatataca
Secondary structure (Cloverleaf model)
>WENV170683919	Cys	GCA
                   t      TCCA tacatataca
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G G G T C     A
        G A        A      | | | | |     G
      T     A C C G       C C C A G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    A - T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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