The detailed information of tRNA gene sequence


Sequence ID>WENV170683927
Genome IDLFRM01010453
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 459
End posion on genome 546
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tacatcataT
tRNA gene sequence 
GCCGGGATAGCCTAGCCAGGTAAGGCGCAAGACTGGAAATCTTGTGGAGCTCTGCTCCTC
CTGGGTTCAAATCCCAGTCCCGGCGTCg
Downstream region at tRNA end position 
gttgaagcaa
Secondary structure (Cloverleaf model)
>WENV170683927	Ser	GGA
                   T      GTCg gttgaagcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        A      | | | | |     A
    C       T C C G       C T G G G     C
    A       | | | |                 T T
    G       A G G C
      G T A        G     TGGAGCTCTGCTCCTC
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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