The detailed information of tRNA gene sequence


Sequence ID>WENV170683929
Genome IDLFRM01010553
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 201
End posion on genome 288
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cagcacacgc
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTTTAAGGTGCAGCTCTCGAAAAGCTGTGTGCCGAAAGGCACC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
aagccccgcg
Secondary structure (Cloverleaf model)
>WENV170683929	Ser	CGA
                   c      GCCA aagccccgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | |                   T T
    T       A G G T
      T T A        G     TGTGCCGAAAGGCACC
                    C - G
                    A - T
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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