The detailed information of tRNA gene sequence


Sequence ID>WENV170683932
Genome IDLFRM01010693
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1605
End posion on genome 1530
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
gataagagat
tRNA gene sequence 
GGGCCATTAGCTCAGTTGGTAGAGCACCTGACTCTTAATCAGGGTGTCCCGGGTTCGAGT
CCCTGATGGCCCACCA
Downstream region at tRNA end position 
aatttcgaat
Secondary structure (Cloverleaf model)
>WENV170683932	Lys	CTT
                   t      ACCA aatttcgaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G T C C C     A
      T G A        A      |   | | |     G
    T       C T C G       C C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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