The detailed information of tRNA gene sequence


Sequence ID>WENV170683965
Genome IDLFRM01012695
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 13908
End posion on genome 13985
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
tcgaacggat
tRNA gene sequence 
GCACACGTGGCCTAGTCTGGATATGGCAGCAGCCTCCTAAGCTGCAGGTCGGGGGTTCGA
ATCCCTCCGTGTGCGCCA
Downstream region at tRNA end position 
cacttctctt
Secondary structure (Cloverleaf model)
>WENV170683965	Arg	CCT
                   t      GCCA cacttctctt
                     G - C
                     C - G
                     A - T
                     C - G
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  T         T C C G       G G G G G     C
  G           | | |                 T T
  G         T G G C
    A T A          A     AGGTC
                    G - C
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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