The detailed information of tRNA gene sequence


Sequence ID>WENV170683970
Genome IDLFRM01012912
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 567
End posion on genome 491
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgcggaacac
tRNA gene sequence 
CGGGATATGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGTCGCAGGTTCAAA
TCCTGTTATCCCGACCA
Downstream region at tRNA end position 
ccagatgatc
Secondary structure (Cloverleaf model)
>WENV170683970	Pro	CGG
                   c      ACCA ccagatgatc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     T G T C C     A
      C G A        G      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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