The detailed information of tRNA gene sequence


Sequence ID>WENV170683977
Genome IDLFRM01013243
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 903
End posion on genome 832
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aacacggctt
tRNA gene sequence 
GCCAAGGTGGCGGAGCGGCTACGCGGTTGACTGCAGATCAACTCCACCCCGGTTCAAATC
CGGGCCTTGGCTtcc
Downstream region at tRNA end position 
atccgatccc
Secondary structure (Cloverleaf model)
>WENV170683977	Cys	GCA
                   t      Ttcc atccgatccc
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     G G G C C     A
        G A        G      | | | | |     A
      C     G G C G       C C C G G     C
      G       | | |                 T T
      G     A C G C
        C T        G     TCCAC
                    G - C
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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