The detailed information of tRNA gene sequence


Sequence ID>WENV170683983
Genome IDLFRM01013540
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 446
End posion on genome 370
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
acttcaaatg
tRNA gene sequence 
GTGCCCGTAGTTCAGTTGGTTAGAGCGTCAGATTGTGGTTCTGAATGTCGTGGGTTCGAG
TCCCATCGGGCACCCCA
Downstream region at tRNA end position 
aatctaaatc
Secondary structure (Cloverleaf model)
>WENV170683983	His	GTG
                   g      CCCA aatctaaatc
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G T G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        G     ATGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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