The detailed information of tRNA gene sequence


Sequence ID>WENV170683992
Genome IDLFRM01014004
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 35
End posion on genome 123
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgttcggcca
tRNA gene sequence 
GGAGGATTCGACTAGCGGCCTATGTCACACGCCTGGAACGCGTGCGGGGAGAAATCCCCT
CAAGGGTTCAAATCCCTTATCCTCCGCCA
Downstream region at tRNA end position 
cagcgagaac
Secondary structure (Cloverleaf model)
>WENV170683992	Ser	GGA
                   a      GCCA cagcgagaac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     T T C C C     A
      C G A        C      | | | | |     A
    G       T C A G       A A G G G     C
    G         | | |                 T T
    C       T G T C
      C T A        A     CGGGGAGAAATCCCCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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