The detailed information of tRNA gene sequence


Sequence ID>WENV170684003
Genome IDLFRM01014377
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 32543
End posion on genome 32459
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
tactgcttat
tRNA gene sequence 
GGTGGGGTAGCGAAGTGGCTAAACGCGGTGGACTGTAAATCCACTCCCTCAGGGTTCGGC
AGTTCGAATCTGTCCCCCACCACCA
Downstream region at tRNA end position 
tacagggcta
Secondary structure (Cloverleaf model)
>WENV170684003	Tyr	GTA
                   t      ACCA tacagggcta
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G T C     A
      T G A        A      | + | | |     G
    G       A G C G       G G C A G     C
    G         | | |                 T T
    C       A C G C
      T A A        G     TCCCTCAGGGTTC
                    G - C
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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