The detailed information of tRNA gene sequence


Sequence ID>WENV170684005
Genome IDLFRM01014377
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 32371
End posion on genome 32297
Amino Acid Gln
Anticodon CTG
Upstream region at tRNA start position 
atttttttat
tRNA gene sequence 
AGGACCATCGCCAAGCGGTAAGGCAATTGGCTCTGACCCAATCATGCGGAGGTTCGAATC
CTCCTGGTCCTGCCA
Downstream region at tRNA end position 
ttgaagtcga
Secondary structure (Cloverleaf model)
>WENV170684005	Gln	CTG
                   t      GCCA ttgaagtcga
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     A - T          T A
                    T     C C T C C     A
        G A        C      | | | | |     G
      C     A C C G       G G A G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     CATGC
                    A - T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       C
                  T       A
                    C T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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