The detailed information of tRNA gene sequence


Sequence ID>WENV170684015
Genome IDLFRM01014924
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 184
End posion on genome 108
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaaccagat
tRNA gene sequence 
TGCGGGGTGGAGCAGCCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTCAAA
TCCAACCCCCGCTACCA
Downstream region at tRNA end position 
atttcagcct
Secondary structure (Cloverleaf model)
>WENV170684015	Met	CAT
                   t      ACCA atttcagcct
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A A C C     A
      C G A        G      | | | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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