The detailed information of tRNA gene sequence


Sequence ID>WENV170684079
Genome IDLFRM01018728
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2140
End posion on genome 2215
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
actataggta
tRNA gene sequence 
GATTCGCTAGCTCAGTAGGTAGAGCACATCCCTTTTAAGGATGGGGTCCTGGGTTCGAAC
CCCAGGCGGATCACTA
Downstream region at tRNA end position 
gcaacgcaaa
Secondary structure (Cloverleaf model)
>WENV170684079	Lys	TTT
                   a      ACTA gcaacgcaaa
                     G - C
                     A - T
                     T - A
                     T + G
                     C - G
                     G - C
                     C - G          C A
                    T     G A C C C     A
      T G A        A      | | | | |     G
    A       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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