The detailed information of tRNA gene sequence


Sequence ID>WENV170684088
Genome IDLFRM01018833
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 2797
End posion on genome 2872
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
canncaggtc
tRNA gene sequence 
GATTCGCTAGCTCAGCAGGTAGAGCACATCCCTTTTAAGGATGGGGTCCTGGGTTCGAGC
CCCAGGCGAATCACTA
Downstream region at tRNA end position 
ccagactcac
Secondary structure (Cloverleaf model)
>WENV170684088	Lys	TTT
                   c      ACTA ccagactcac
                     G - C
                     A - T
                     T - A
                     T - A
                     C - G
                     G - C
                     C - G          C G
                    T     G A C C C     A
      C G A        A      | | | | |     G
    A       C T C G       C T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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