The detailed information of tRNA gene sequence


Sequence ID>WENV170684099
Genome IDLFRM01019964
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 11763
End posion on genome 11853
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgtcataaac
tRNA gene sequence 
GGAGTAGTACTCAAGAGGCTGAAGAGGTGCCCCTGCTAAGGGCATAGGTCGGGAAACCGG
CGCAGGGGTTCAAATCCCCTCTACTCCGCCA
Downstream region at tRNA end position 
gttggcccgt
Secondary structure (Cloverleaf model)
>WENV170684099	Ser	GCT
                   c      GCCA gttggcccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     T C C C C     A
      A G A        A      | | | | |     A
    G       A C T C       A G G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGGAAACCGGCGC
                    T - A
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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