The detailed information of tRNA gene sequence


Sequence ID>WENV170684100
Genome IDLFRM01019964
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 11857
End posion on genome 11933
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tccgccagtt
tRNA gene sequence 
GGCCCGTTGGAGAAGCGGTTTAACTCACATGCCTTTCACGCATGCATGCACGGGTTCGAA
TCCCGTACGGGTCACCA
Downstream region at tRNA end position 
atattgcaaa
Secondary structure (Cloverleaf model)
>WENV170684100	Glu	TTC
                   t      ACCA atattgcaaa
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      C G A        G      | | | | |     G
    G       A G A G       A C G G G     C
    G         | | |                 T T
    T       A C T C
      T T A        A     CATGC
                    C - G
                    A - T
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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