The detailed information of tRNA gene sequence


Sequence ID>WENV170684107
Genome IDLFRM01020193
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 251
End posion on genome 335
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
cgggcccatc
tRNA gene sequence 
GCGAAAGTGGCGGAATTGGTAGACGCCCTGGTTTTAGGTACCAGTGCCGCAAGGCGTGGG
GGTTCGAGTCCCCCCTTTCGCACCA
Downstream region at tRNA end position 
cccctgcagg
Secondary structure (Cloverleaf model)
>WENV170684107	Leu	TAG
                   c      ACCA cccctgcagg
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C          T G
                    T     C C C C C     A
      T A A        G      | | | | |     G
    T       G G C G       G G G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        C     TGCCGCAAGGCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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