The detailed information of tRNA gene sequence


Sequence ID>WENV170684128
Genome IDLFRM01021605
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1093
End posion on genome 1017
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttattttttt
tRNA gene sequence 
GGCGAGATAGCTCAGTTGGTTAGAGCGCATGATTCATAATCATGAGGTCCCGGGATCATG
CCCCGGTCTCGCTACTA
Downstream region at tRNA end position 
tttgagaaca
Secondary structure (Cloverleaf model)
>WENV170684128	Met	CAT
                   t      ACTA tttgagaaca
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          C G
                    T     G G C C C     T
      T G A        A      | | | | |     A
    T       C T C G       C C G G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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