The detailed information of tRNA gene sequence


Sequence ID>WENV170684135
Genome IDLFRM01022137
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1079
End posion on genome 1154
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
aaaagcgaaa
tRNA gene sequence 
GTGCCCGTAGCTCAGCGGATAGAGCGTTGGACTCCGGATCCAAAGGTCGGGAGTTCGAGT
CTCCCCGGGCACGCCA
Downstream region at tRNA end position 
aaatatgata
Secondary structure (Cloverleaf model)
>WENV170684135	Arg	CCG
                   a      GCCA aaatatgata
                     G - C
                     T - A
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     C C C T C     A
      C G A        A      | | | | |     G
    G       C T C G       G G G A G     C
    G       | | | |                 T T
    A       G A G C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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