The detailed information of tRNA gene sequence


Sequence ID>WENV170684146
Genome IDLFRM01022839
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 19904
End posion on genome 19980
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cggcatatgt
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGCCGAGGGTTCGAG
TCCCTTCCGGGTCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170684146	Asp	GTC
                   t      GCCA nnnnnnnnnn
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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