The detailed information of tRNA gene sequence


Sequence ID>WENV170684149
Genome IDLFRM01022983
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 616
End posion on genome 690
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cttcttcgat
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGTAGAGCACTGCCTTCACACGGCAGGGGTCACTGGTTCGATCC
CAGTACCGCCCACCA
Downstream region at tRNA end position 
gcgatgaaaa
Secondary structure (Cloverleaf model)
>WENV170684149	Val	CAC
                   t      ACCA gcgatgaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     T G A C C     A
        G A        A      | | | | |     G
      C     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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