The detailed information of tRNA gene sequence


Sequence ID>WENV170684156
Genome IDLFRM01023697
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 4233
End posion on genome 4307
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
gcactgtctt
tRNA gene sequence 
GGGGCTGTGGCGCAGAGGGAGCGCGCTTCCTTGGCATGGAAGAGGTCAGGGGTTCGAATC
CCCTCAGCTCCACCA
Downstream region at tRNA end position 
gtgaagataa
Secondary structure (Cloverleaf model)
>WENV170684156	Ala	GGC
                   t      ACCA gtgaagataa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C C C     A
        G A        G      | | | | |     G
      A     C G C G       A G G G G     C
      G     | | | |                 T T
      G     G C G C
        G A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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