The detailed information of tRNA gene sequence


Sequence ID>WENV170684170
Genome IDLFRM01024591
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 7259
End posion on genome 7183
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
tcagatgctT
tRNA gene sequence 
GGGCCTGTAGCTTAGTTCGGCAGAGCGACGGACTCTTAATCCGTAGGCCAAGGGTTCAAA
TCCCTTCAGGCCCGTCg
Downstream region at tRNA end position 
aacacttgtc
Secondary structure (Cloverleaf model)
>WENV170684170	Lys	CTT
                   T      GTCg aacacttgtc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       T T C G       A A G G G     C
    C       + | | |                 T T
    G       G A G C
      G C A        G     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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