The detailed information of tRNA gene sequence


Sequence ID>WENV170684186
Genome IDLFRM01025663
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 20023
End posion on genome 20094
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tgttatgacg
tRNA gene sequence 
GCCCCGGTAGGGTAGTGGATATCCTGAAAGCCTCCGGAGCTTTCGACCTGGGTTCAAATC
CCAGCCGGGGCGtcc
Downstream region at tRNA end position 
tatttctcaa
Secondary structure (Cloverleaf model)
>WENV170684186	Arg	CCG
                   g      Gtcc tatttctcaa
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     G A C C C     A
      T G A        A      | | | | |     A
    G       T G G G       C T G G G     C
    G         | | +                 T T
    A       T C C T
      T A          G     CGAC
                    A - T
                    A - T
                    A - T
                    G - C
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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