The detailed information of tRNA gene sequence


Sequence ID>WENV170684200
Genome IDLFRM01025938
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 42798
End posion on genome 42727
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ttattcattt
tRNA gene sequence 
GCCGTCGTGGCTTAGCGGTATAGCGGCTGATTCGTAATCAGCAGGCCGAGGGTTCGAATC
CCTCCGGCGGCTtaa
Downstream region at tRNA end position 
taattttttt
Secondary structure (Cloverleaf model)
>WENV170684200	Thr	CGT
                   t      Ttaa taattttttt
                     G - C
                     C - G
                     C - G
                     G - C
                     T + G
                     C - G
                     G - C          T A
                    T     C T C C C     A
        G A        G      | | | | |     G
      C     T T C G       G A G G G     C
      G       | | |                 T T
      G     T A G C
        T A        G     AGGCC
                    G - C
                    C - G
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK