The detailed information of tRNA gene sequence


Sequence ID>WENV170684214
Genome IDLFRM01026600
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 158
End posion on genome 82
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cccaccaaat
tRNA gene sequence 
GGCCCGGTAGTTCAGTTGGTTAGAACGCTAGCCTGTCACGCTAGAGGCCGACGGTTCGAG
TCCGTTCCGGGTCGCCA
Downstream region at tRNA end position 
aacctgcctc
Secondary structure (Cloverleaf model)
>WENV170684214	Asp	GTC
                   t      GCCA aacctgcctc
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T G
                    T     T T G C C     A
      T G A        A      + | | | |     G
    T       C T T G       G A C G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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