The detailed information of tRNA gene sequence


Sequence ID>WENV170684219
Genome IDLFRM01027108
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 12182
End posion on genome 12107
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
tgttttttgc
tRNA gene sequence 
GAGCCATTAGCTCAGTCGGTAGAGCACCTGACTTTTAATCAGGGAGTCCCGCGTTCGAGT
CGCGGATGGCTCACCA
Downstream region at tRNA end position 
tgtggccccg
Secondary structure (Cloverleaf model)
>WENV170684219	Lys	TTT
                   c      ACCA tgtggccccg
                     G - C
                     A - T
                     G - C
                     C - G
                     C - G
                     A - T
                     T - A          T G
                    T     G G C G C     A
      T G A        A      | | | | |     G
    C       C T C G       C C G C G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GAGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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