The detailed information of tRNA gene sequence


Sequence ID>WENV170684220
Genome IDLFRM01027108
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 12103
End posion on genome 12029
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ctcaccatgt
tRNA gene sequence 
GGCCCCGTGGTCAAGTGGTTAAGACACCGGCCTTTCACGCCGGTAACAGGGGTTCGAATC
CCCTCGGGGTCACCA
Downstream region at tRNA end position 
tttttttgac
Secondary structure (Cloverleaf model)
>WENV170684220	Glu	TTC
                   t      ACCA tttttttgac
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      T A          A     TAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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