The detailed information of tRNA gene sequence


Sequence ID>WENV170684280
Genome IDLFRM01030253
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 38826
End posion on genome 38899
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ggcgatacgc
tRNA gene sequence 
GCGGGTGTAGTTCAATGGTAGAACATCAGCCTTCCAAGCTGATTGCGTGGGTTCGATTCC
CATCACCCGCTCCA
Downstream region at tRNA end position 
ttttttcccg
Secondary structure (Cloverleaf model)
>WENV170684280	Gly	TCC
                   c      TCCA ttttttcccg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T A C C C     A
        A A        A      + | | | |     G
      T     C T T G       G T G G G     C
      G     | | | |                 T T
      G     G A A C
        T A        A     TTGC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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