The detailed information of tRNA gene sequence


Sequence ID>WENV170684286
Genome IDLFRM01030566
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 1535
End posion on genome 1609
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccctgcataa
tRNA gene sequence 
GGCCCATTCGTCTATCGGTTAGGACGCAAGATTTTCATTCTTGAAAGAGGAGTTCGATTC
TCCTATGGGCTACTA
Downstream region at tRNA end position 
ataaaaaaaa
Secondary structure (Cloverleaf model)
>WENV170684286	Glu	TTC
                   a      ACTA ataaaaaaaa
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C C T C     A
      C T A        C      | | | | |     G
    G       T C T G       A G G A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    C - G
                    A - T
                    A - T
                    G - C
                    A - T
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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