The detailed information of tRNA gene sequence


Sequence ID>WENV170684300
Genome IDLFRM01031637
Search identical group
Phylum/Class[LFRM] anaerobic digester metagenome; pool of bioreactors CSTR01a, CSTR02a, and CSTR03a; thermophilic anaerobic digestion of cattle
Species
Start position on genome 263
End posion on genome 190
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
atttaaacac
tRNA gene sequence 
GGGCCTGTCGCTCAGCTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGATGGTTCGAG
TCCATTCAGGCCCAttt
Downstream region at tRNA end position 
agcaaactac
Secondary structure (Cloverleaf model)
>WENV170684300	Ile	GAT
                   c      Attt agcaaactac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T T A C C     A
      C G A        C      + | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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